Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfaip3Q60769 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfaip3Q60769 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Gm12922-201ENSMUST00000120626 809 ntBASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Gm9847-201ENSMUST00000052528 599 ntBASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfaip3Q60769 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip3Q60769 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Tnfaip3Q60769 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.39■□□□□ 0.7
Tnfaip3Q60769 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfaip3Q60769 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.39■□□□□ 0.69
Tnfaip3Q60769 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfaip3Q60769 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfaip3Q60769 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfaip3Q60769 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.39■□□□□ 0.69
Tnfaip3Q60769 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfaip3Q60769 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfaip3Q60769 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfaip3Q60769 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.38■□□□□ 0.69
Tnfaip3Q60769 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.38■□□□□ 0.69
Tnfaip3Q60769 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfaip3Q60769 Gm13241-201ENSMUST00000094493 780 ntBASIC19.38■□□□□ 0.69
Tnfaip3Q60769 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip3Q60769 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip3Q60769 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip3Q60769 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip3Q60769 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip3Q60769 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip3Q60769 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Notumos-201ENSMUST00000151998 2659 ntBASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.36■□□□□ 0.69
Tnfaip3Q60769 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip3Q60769 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Gm9870-201ENSMUST00000063874 645 ntBASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfaip3Q60769 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.33■□□□□ 0.69
Tnfaip3Q60769 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.33■□□□□ 0.68
Tnfaip3Q60769 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfaip3Q60769 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfaip3Q60769 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Tnfaip3Q60769 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfaip3Q60769 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfaip3Q60769 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Tnfaip3Q60769 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfaip3Q60769 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnfaip3Q60769 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.31■□□□□ 0.68
Tnfaip3Q60769 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip3Q60769 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip3Q60769 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Tnfaip3Q60769 Golgb1-201ENSMUST00000023534 498 ntBASIC19.3■□□□□ 0.68
Tnfaip3Q60769 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip3Q60769 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip3Q60769 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms