Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav2Q5R1I9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Gm9870-201ENSMUST00000063874 645 ntBASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav2Q5R1I9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav2Q5R1I9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trav2Q5R1I9 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.44■□□□□ 0.22
Trav2Q5R1I9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav2Q5R1I9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav2Q5R1I9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav2Q5R1I9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.44■□□□□ 0.22
Trav2Q5R1I9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.43■□□□□ 0.22
Trav2Q5R1I9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav2Q5R1I9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav2Q5R1I9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Gm21956-201ENSMUST00000179946 522 ntBASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav2Q5R1I9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav2Q5R1I9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav2Q5R1I9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav2Q5R1I9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav2Q5R1I9 Gm12821-201ENSMUST00000120022 600 ntBASIC16.39■□□□□ 0.21
Trav2Q5R1I9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav2Q5R1I9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.39■□□□□ 0.21
Trav2Q5R1I9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.38■□□□□ 0.21
Trav2Q5R1I9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav2Q5R1I9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms