Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-1Q5R1I8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-1Q5R1I8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav3-1Q5R1I8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-1Q5R1I8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav3-1Q5R1I8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav3-1Q5R1I8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav3-1Q5R1I8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav3-1Q5R1I8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms