Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-2Q5R1I3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-2Q5R1I3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-2Q5R1I3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7-2Q5R1I3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav7-2Q5R1I3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-2Q5R1I3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7-2Q5R1I3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7-2Q5R1I3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav7-2Q5R1I3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Gm43566-201ENSMUST00000196851 808 ntBASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-2Q5R1I3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms