Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf223Q3UV31 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf223Q3UV31 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf223Q3UV31 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf223Q3UV31 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf223Q3UV31 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf223Q3UV31 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf223Q3UV31 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
Rnf223Q3UV31 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rnf223Q3UV31 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.16■□□□□ 0.82
Rnf223Q3UV31 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf223Q3UV31 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rnf223Q3UV31 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf223Q3UV31 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf223Q3UV31 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf223Q3UV31 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf223Q3UV31 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf223Q3UV31 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.12■□□□□ 0.81
Rnf223Q3UV31 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf223Q3UV31 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf223Q3UV31 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf223Q3UV31 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf223Q3UV31 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf223Q3UV31 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf223Q3UV31 Gm27454-201ENSMUST00000185090 204 ntBASIC20.09■□□□□ 0.81
Rnf223Q3UV31 Gm12821-201ENSMUST00000120022 600 ntBASIC20.08■□□□□ 0.81
Rnf223Q3UV31 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf223Q3UV31 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.08■□□□□ 0.81
Rnf223Q3UV31 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf223Q3UV31 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf223Q3UV31 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf223Q3UV31 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rnf223Q3UV31 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf223Q3UV31 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf223Q3UV31 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf223Q3UV31 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf223Q3UV31 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf223Q3UV31 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms