Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.97■□□□□ 0.79
Rnf44Q3UHJ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rnf44Q3UHJ8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf44Q3UHJ8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rnf44Q3UHJ8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf44Q3UHJ8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf44Q3UHJ8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf44Q3UHJ8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Gm22238-201ENSMUST00000175222 88 ntBASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
Rnf44Q3UHJ8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Rnf44Q3UHJ8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf44Q3UHJ8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf44Q3UHJ8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms