Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh6P97326 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21■□□□□ 0.95
Cdh6P97326 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21■□□□□ 0.95
Cdh6P97326 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh6P97326 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Cdh6P97326 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh6P97326 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Cdh6P97326 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cdh6P97326 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.99■□□□□ 0.95
Cdh6P97326 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh6P97326 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
Cdh6P97326 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh6P97326 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh6P97326 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdh6P97326 Rps24-207ENSMUST00000224568 714 ntBASIC20.98■□□□□ 0.95
Cdh6P97326 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdh6P97326 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh6P97326 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh6P97326 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh6P97326 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh6P97326 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdh6P97326 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh6P97326 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh6P97326 Gm45102-201ENSMUST00000207427 857 ntBASIC20.97■□□□□ 0.95
Cdh6P97326 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh6P97326 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh6P97326 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cdh6P97326 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdh6P97326 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh6P97326 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh6P97326 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.96■□□□□ 0.95
Cdh6P97326 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh6P97326 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh6P97326 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh6P97326 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cdh6P97326 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Cdh6P97326 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh6P97326 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh6P97326 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh6P97326 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh6P97326 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.95■□□□□ 0.94
Cdh6P97326 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cdh6P97326 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh6P97326 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.95■□□□□ 0.94
Cdh6P97326 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cdh6P97326 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh6P97326 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Cdh6P97326 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh6P97326 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh6P97326 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh6P97326 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cdh6P97326 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh6P97326 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh6P97326 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh6P97326 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh6P97326 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh6P97326 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh6P97326 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.92■□□□□ 0.94
Cdh6P97326 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh6P97326 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh6P97326 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdh6P97326 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh6P97326 Gm14117-201ENSMUST00000122417 843 ntBASIC20.91■□□□□ 0.94
Cdh6P97326 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh6P97326 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh6P97326 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh6P97326 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdh6P97326 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdh6P97326 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cdh6P97326 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.9■□□□□ 0.94
Cdh6P97326 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.9■□□□□ 0.94
Cdh6P97326 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdh6P97326 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.9■□□□□ 0.94
Cdh6P97326 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Cdh6P97326 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cdh6P97326 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh6P97326 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdh6P97326 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.89■□□□□ 0.94
Cdh6P97326 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh6P97326 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.89■□□□□ 0.93
Cdh6P97326 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cdh6P97326 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh6P97326 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh6P97326 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh6P97326 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh6P97326 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.88■□□□□ 0.93
Cdh6P97326 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh6P97326 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms