Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gbx1P82976 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gbx1P82976 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gbx1P82976 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gbx1P82976 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gbx1P82976 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gbx1P82976 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gbx1P82976 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gbx1P82976 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.39■□□□□ 0.69
Gbx1P82976 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gbx1P82976 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gbx1P82976 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.39■□□□□ 0.69
Gbx1P82976 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gbx1P82976 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gbx1P82976 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gbx1P82976 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Gbx1P82976 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gbx1P82976 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.38■□□□□ 0.69
Gbx1P82976 Gm45444-201ENSMUST00000211394 898 ntBASIC19.38■□□□□ 0.69
Gbx1P82976 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.38■□□□□ 0.69
Gbx1P82976 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.38■□□□□ 0.69
Gbx1P82976 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gbx1P82976 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gbx1P82976 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gbx1P82976 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.37■□□□□ 0.69
Gbx1P82976 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gbx1P82976 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gbx1P82976 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.36■□□□□ 0.69
Gbx1P82976 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Gbx1P82976 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gbx1P82976 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gbx1P82976 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gbx1P82976 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gbx1P82976 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.35■□□□□ 0.69
Gbx1P82976 Gm13238-201ENSMUST00000117655 780 ntBASIC19.35■□□□□ 0.69
Gbx1P82976 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gbx1P82976 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.35■□□□□ 0.69
Gbx1P82976 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gbx1P82976 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gbx1P82976 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gbx1P82976 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gbx1P82976 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.35■□□□□ 0.69
Gbx1P82976 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Gbx1P82976 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gbx1P82976 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gbx1P82976 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.34■□□□□ 0.69
Gbx1P82976 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gbx1P82976 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gbx1P82976 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gbx1P82976 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gbx1P82976 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gbx1P82976 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gbx1P82976 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gbx1P82976 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.33■□□□□ 0.69
Gbx1P82976 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gbx1P82976 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gbx1P82976 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Gbx1P82976 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gbx1P82976 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gbx1P82976 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Gbx1P82976 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gbx1P82976 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gbx1P82976 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Gbx1P82976 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gbx1P82976 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gbx1P82976 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gbx1P82976 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gbx1P82976 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gbx1P82976 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gbx1P82976 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Gbx1P82976 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gbx1P82976 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gbx1P82976 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gbx1P82976 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Gbx1P82976 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Gbx1P82976 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gbx1P82976 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.31■□□□□ 0.68
Gbx1P82976 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gbx1P82976 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms