Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gcm1P70348 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gcm1P70348 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gcm1P70348 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcm1P70348 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcm1P70348 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gcm1P70348 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
Gcm1P70348 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcm1P70348 Gm9847-201ENSMUST00000052528 599 ntBASIC17.26■□□□□ 0.35
Gcm1P70348 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcm1P70348 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
Gcm1P70348 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcm1P70348 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gcm1P70348 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.25■□□□□ 0.35
Gcm1P70348 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Gm13241-201ENSMUST00000094493 780 ntBASIC17.25■□□□□ 0.35
Gcm1P70348 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gcm1P70348 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gcm1P70348 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.24■□□□□ 0.35
Gcm1P70348 Gm12922-201ENSMUST00000120626 809 ntBASIC17.24■□□□□ 0.35
Gcm1P70348 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcm1P70348 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Gcm1P70348 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcm1P70348 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcm1P70348 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcm1P70348 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gcm1P70348 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gcm1P70348 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.24■□□□□ 0.35
Gcm1P70348 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Gcm1P70348 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gcm1P70348 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gcm1P70348 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gcm1P70348 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gcm1P70348 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gcm1P70348 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gcm1P70348 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gcm1P70348 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.22■□□□□ 0.35
Gcm1P70348 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gcm1P70348 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gcm1P70348 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gcm1P70348 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gcm1P70348 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gcm1P70348 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.21■□□□□ 0.35
Gcm1P70348 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gcm1P70348 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gcm1P70348 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gcm1P70348 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gcm1P70348 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gcm1P70348 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gcm1P70348 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gcm1P70348 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gcm1P70348 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gcm1P70348 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.2■□□□□ 0.34
Gcm1P70348 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.2■□□□□ 0.34
Gcm1P70348 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gcm1P70348 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gcm1P70348 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.19■□□□□ 0.34
Gcm1P70348 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Gcm1P70348 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gcm1P70348 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Gcm1P70348 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gcm1P70348 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.18■□□□□ 0.34
Gcm1P70348 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.18■□□□□ 0.34
Gcm1P70348 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gcm1P70348 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.18■□□□□ 0.34
Gcm1P70348 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gcm1P70348 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms