Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Lim2P56563 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lim2P56563 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lim2P56563 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Lim2P56563 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.71■□□□□ 0.91
Lim2P56563 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.71■□□□□ 0.91
Lim2P56563 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lim2P56563 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lim2P56563 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lim2P56563 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lim2P56563 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lim2P56563 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lim2P56563 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lim2P56563 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Lim2P56563 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lim2P56563 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lim2P56563 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.69■□□□□ 0.9
Lim2P56563 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lim2P56563 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lim2P56563 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lim2P56563 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lim2P56563 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lim2P56563 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lim2P56563 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lim2P56563 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lim2P56563 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lim2P56563 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lim2P56563 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.67■□□□□ 0.9
Lim2P56563 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.67■□□□□ 0.9
Lim2P56563 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lim2P56563 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lim2P56563 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lim2P56563 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lim2P56563 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Lim2P56563 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.66■□□□□ 0.9
Lim2P56563 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.66■□□□□ 0.9
Lim2P56563 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lim2P56563 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lim2P56563 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lim2P56563 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lim2P56563 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lim2P56563 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Lim2P56563 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.65■□□□□ 0.9
Lim2P56563 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lim2P56563 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lim2P56563 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lim2P56563 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lim2P56563 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.64■□□□□ 0.89
Lim2P56563 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lim2P56563 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Lim2P56563 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.63■□□□□ 0.89
Lim2P56563 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.63■□□□□ 0.89
Lim2P56563 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.63■□□□□ 0.89
Lim2P56563 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.63■□□□□ 0.89
Lim2P56563 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.63■□□□□ 0.89
Lim2P56563 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.63■□□□□ 0.89
Lim2P56563 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lim2P56563 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
Lim2P56563 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Lim2P56563 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lim2P56563 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lim2P56563 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lim2P56563 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lim2P56563 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lim2P56563 Gm22238-201ENSMUST00000175222 88 ntBASIC20.61■□□□□ 0.89
Lim2P56563 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.61■□□□□ 0.89
Lim2P56563 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lim2P56563 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lim2P56563 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.6■□□□□ 0.89
Lim2P56563 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.6■□□□□ 0.89
Lim2P56563 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lim2P56563 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lim2P56563 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms