Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC26.63■■□□□ 1.85
Msh6P54276 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Msh6P54276 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Msh6P54276 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Msh6P54276 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.62■■□□□ 1.85
Msh6P54276 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.62■■□□□ 1.85
Msh6P54276 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Msh6P54276 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Msh6P54276 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Msh6P54276 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Msh6P54276 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh6P54276 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh6P54276 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh6P54276 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
Msh6P54276 Gm43017-201ENSMUST00000198296 752 ntBASIC26.61■■□□□ 1.85
Msh6P54276 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.61■■□□□ 1.85
Msh6P54276 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.61■■□□□ 1.85
Msh6P54276 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh6P54276 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh6P54276 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Msh6P54276 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Msh6P54276 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
Msh6P54276 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Msh6P54276 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC26.6■■□□□ 1.85
Msh6P54276 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.6■■□□□ 1.85
Msh6P54276 Gm37415-201ENSMUST00000192265 2054 ntBASIC26.6■■□□□ 1.85
Msh6P54276 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Msh6P54276 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Msh6P54276 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Msh6P54276 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Msh6P54276 Mir7075-201ENSMUST00000184187 82 ntBASIC26.59■■□□□ 1.85
Msh6P54276 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Msh6P54276 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Msh6P54276 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Msh6P54276 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Msh6P54276 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Msh6P54276 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Msh6P54276 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Msh6P54276 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Msh6P54276 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Msh6P54276 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC26.58■■□□□ 1.84
Msh6P54276 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Msh6P54276 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Msh6P54276 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Msh6P54276 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Msh6P54276 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Msh6P54276 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Msh6P54276 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
Msh6P54276 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.57■■□□□ 1.84
Msh6P54276 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Msh6P54276 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Msh6P54276 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.56■■□□□ 1.84
Msh6P54276 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Msh6P54276 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Msh6P54276 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Msh6P54276 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Msh6P54276 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.55■■□□□ 1.84
Msh6P54276 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.55■■□□□ 1.84
Msh6P54276 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Msh6P54276 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.54■■□□□ 1.84
Msh6P54276 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Msh6P54276 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Msh6P54276 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Msh6P54276 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Msh6P54276 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Msh6P54276 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Msh6P54276 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
Msh6P54276 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC26.53■■□□□ 1.84
Msh6P54276 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Msh6P54276 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Msh6P54276 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Msh6P54276 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Msh6P54276 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Msh6P54276 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
Msh6P54276 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Msh6P54276 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.51■■□□□ 1.83
Msh6P54276 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.51■■□□□ 1.83
Msh6P54276 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Msh6P54276 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Msh6P54276 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Msh6P54276 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Msh6P54276 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Msh6P54276 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Msh6P54276 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.5■■□□□ 1.83
Msh6P54276 AC164629.5-201ENSMUST00000220387 632 ntBASIC26.5■■□□□ 1.83
Msh6P54276 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Msh6P54276 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Msh6P54276 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Msh6P54276 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Msh6P54276 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Msh6P54276 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Msh6P54276 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.49■■□□□ 1.83
Msh6P54276 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC26.48■■□□□ 1.83
Msh6P54276 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms