Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.27■□□□□ 0.84
Lbx1P52955 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lbx1P52955 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lbx1P52955 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lbx1P52955 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lbx1P52955 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.26■□□□□ 0.83
Lbx1P52955 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lbx1P52955 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.26■□□□□ 0.83
Lbx1P52955 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.26■□□□□ 0.83
Lbx1P52955 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lbx1P52955 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lbx1P52955 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lbx1P52955 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.25■□□□□ 0.83
Lbx1P52955 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lbx1P52955 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lbx1P52955 Gm12527-201ENSMUST00000117967 564 ntBASIC20.24■□□□□ 0.83
Lbx1P52955 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lbx1P52955 Gm4968-201ENSMUST00000071458 858 ntBASIC20.24■□□□□ 0.83
Lbx1P52955 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lbx1P52955 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lbx1P52955 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lbx1P52955 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Lbx1P52955 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lbx1P52955 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lbx1P52955 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lbx1P52955 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.22■□□□□ 0.83
Lbx1P52955 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.22■□□□□ 0.83
Lbx1P52955 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lbx1P52955 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lbx1P52955 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lbx1P52955 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lbx1P52955 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.2■□□□□ 0.82
Lbx1P52955 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.2■□□□□ 0.82
Lbx1P52955 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lbx1P52955 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lbx1P52955 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lbx1P52955 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lbx1P52955 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.19■□□□□ 0.82
Lbx1P52955 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.19■□□□□ 0.82
Lbx1P52955 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.19■□□□□ 0.82
Lbx1P52955 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.19■□□□□ 0.82
Lbx1P52955 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lbx1P52955 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.19■□□□□ 0.82
Lbx1P52955 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lbx1P52955 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.19■□□□□ 0.82
Lbx1P52955 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lbx1P52955 Smad6-203ENSMUST00000179458 273 ntBASIC20.18■□□□□ 0.82
Lbx1P52955 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.18■□□□□ 0.82
Lbx1P52955 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.18■□□□□ 0.82
Lbx1P52955 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lbx1P52955 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.17■□□□□ 0.82
Lbx1P52955 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lbx1P52955 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lbx1P52955 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lbx1P52955 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lbx1P52955 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lbx1P52955 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lbx1P52955 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.16■□□□□ 0.82
Lbx1P52955 Mir5133-201ENSMUST00000174955 77 ntBASIC20.16■□□□□ 0.82
Lbx1P52955 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.16■□□□□ 0.82
Lbx1P52955 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.16■□□□□ 0.82
Lbx1P52955 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lbx1P52955 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lbx1P52955 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lbx1P52955 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lbx1P52955 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Lbx1P52955 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lbx1P52955 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.15■□□□□ 0.82
Lbx1P52955 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.15■□□□□ 0.82
Lbx1P52955 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lbx1P52955 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lbx1P52955 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lbx1P52955 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lbx1P52955 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.14■□□□□ 0.81
Lbx1P52955 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lbx1P52955 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Lbx1P52955 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lbx1P52955 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms