Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rph3aP47708 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rph3aP47708 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rph3aP47708 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rph3aP47708 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3aP47708 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3aP47708 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3aP47708 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rph3aP47708 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3aP47708 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3aP47708 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rph3aP47708 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3aP47708 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rph3aP47708 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rph3aP47708 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rph3aP47708 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rph3aP47708 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.83■□□□□ 0.76
Rph3aP47708 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rph3aP47708 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rph3aP47708 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rph3aP47708 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rph3aP47708 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.82■□□□□ 0.76
Rph3aP47708 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rph3aP47708 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rph3aP47708 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rph3aP47708 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.82■□□□□ 0.76
Rph3aP47708 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rph3aP47708 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rph3aP47708 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rph3aP47708 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.82■□□□□ 0.76
Rph3aP47708 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Rph3aP47708 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rph3aP47708 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3aP47708 Gm40881-201ENSMUST00000223397 166 ntBASIC19.81■□□□□ 0.76
Rph3aP47708 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3aP47708 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3aP47708 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.81■□□□□ 0.76
Rph3aP47708 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rph3aP47708 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rph3aP47708 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3aP47708 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.8■□□□□ 0.76
Rph3aP47708 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rph3aP47708 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rph3aP47708 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rph3aP47708 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3aP47708 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3aP47708 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3aP47708 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Rph3aP47708 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rph3aP47708 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.79■□□□□ 0.76
Rph3aP47708 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.79■□□□□ 0.76
Rph3aP47708 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3aP47708 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3aP47708 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3aP47708 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3aP47708 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rph3aP47708 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.78■□□□□ 0.76
Rph3aP47708 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.78■□□□□ 0.76
Rph3aP47708 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rph3aP47708 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Rph3aP47708 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rph3aP47708 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.77■□□□□ 0.76
Rph3aP47708 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rph3aP47708 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rph3aP47708 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3aP47708 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3aP47708 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.76■□□□□ 0.75
Rph3aP47708 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rph3aP47708 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms