Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
Abca1P41233 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Abca1P41233 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca1P41233 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca1P41233 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca1P41233 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca1P41233 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.06■□□□□ 0.32
Abca1P41233 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Abca1P41233 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.06■□□□□ 0.32
Abca1P41233 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Abca1P41233 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Abca1P41233 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.06■□□□□ 0.32
Abca1P41233 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca1P41233 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.05■□□□□ 0.32
Abca1P41233 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Abca1P41233 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca1P41233 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.04■□□□□ 0.32
Abca1P41233 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abca1P41233 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca1P41233 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.04■□□□□ 0.32
Abca1P41233 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Abca1P41233 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca1P41233 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca1P41233 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca1P41233 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca1P41233 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca1P41233 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca1P41233 Mir7075-201ENSMUST00000184187 82 ntBASIC17.03■□□□□ 0.32
Abca1P41233 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca1P41233 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Abca1P41233 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.03■□□□□ 0.32
Abca1P41233 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Abca1P41233 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca1P41233 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.02■□□□□ 0.32
Abca1P41233 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca1P41233 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Abca1P41233 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca1P41233 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Abca1P41233 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca1P41233 Gm5874-201ENSMUST00000096101 508 ntBASIC17.02■□□□□ 0.32
Abca1P41233 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abca1P41233 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abca1P41233 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abca1P41233 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.01■□□□□ 0.31
Abca1P41233 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca1P41233 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca1P41233 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abca1P41233 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17■□□□□ 0.31
Abca1P41233 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Abca1P41233 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Abca1P41233 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca1P41233 Gm17641-201ENSMUST00000166328 2350 ntBASIC17■□□□□ 0.31
Abca1P41233 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abca1P41233 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abca1P41233 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Abca1P41233 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.99■□□□□ 0.31
Abca1P41233 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca1P41233 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.98■□□□□ 0.31
Abca1P41233 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Abca1P41233 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.98■□□□□ 0.31
Abca1P41233 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.98■□□□□ 0.31
Abca1P41233 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Abca1P41233 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms