Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.26■□□□□ 0.67
Sox6P40645 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Sox6P40645 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.25■□□□□ 0.67
Sox6P40645 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.25■□□□□ 0.67
Sox6P40645 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
Sox6P40645 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox6P40645 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox6P40645 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Sox6P40645 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Sox6P40645 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox6P40645 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
Sox6P40645 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox6P40645 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.23■□□□□ 0.67
Sox6P40645 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.23■□□□□ 0.67
Sox6P40645 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox6P40645 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox6P40645 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox6P40645 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sox6P40645 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox6P40645 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox6P40645 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox6P40645 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox6P40645 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox6P40645 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox6P40645 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox6P40645 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox6P40645 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox6P40645 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox6P40645 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sox6P40645 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox6P40645 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox6P40645 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sox6P40645 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.21■□□□□ 0.67
Sox6P40645 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Sox6P40645 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox6P40645 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.21■□□□□ 0.67
Sox6P40645 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sox6P40645 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.2■□□□□ 0.66
Sox6P40645 Gm45444-201ENSMUST00000211394 898 ntBASIC19.2■□□□□ 0.66
Sox6P40645 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox6P40645 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox6P40645 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox6P40645 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox6P40645 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox6P40645 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sox6P40645 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Sox6P40645 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox6P40645 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sox6P40645 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox6P40645 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Sox6P40645 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.18■□□□□ 0.66
Sox6P40645 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sox6P40645 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sox6P40645 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sox6P40645 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox6P40645 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
Sox6P40645 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sox6P40645 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sox6P40645 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox6P40645 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sox6P40645 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sox6P40645 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox6P40645 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms