Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Col8a2P25318 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col8a2P25318 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col8a2P25318 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Col8a2P25318 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.3■□□□□ 0.36
Col8a2P25318 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
Col8a2P25318 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col8a2P25318 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.3■□□□□ 0.36
Col8a2P25318 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col8a2P25318 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col8a2P25318 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col8a2P25318 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col8a2P25318 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col8a2P25318 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col8a2P25318 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col8a2P25318 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.29■□□□□ 0.36
Col8a2P25318 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.29■□□□□ 0.36
Col8a2P25318 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.29■□□□□ 0.36
Col8a2P25318 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.29■□□□□ 0.36
Col8a2P25318 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.29■□□□□ 0.36
Col8a2P25318 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col8a2P25318 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.28■□□□□ 0.36
Col8a2P25318 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.28■□□□□ 0.36
Col8a2P25318 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.28■□□□□ 0.36
Col8a2P25318 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col8a2P25318 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.28■□□□□ 0.36
Col8a2P25318 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col8a2P25318 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col8a2P25318 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col8a2P25318 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Col8a2P25318 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col8a2P25318 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col8a2P25318 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col8a2P25318 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.26■□□□□ 0.35
Col8a2P25318 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.26■□□□□ 0.35
Col8a2P25318 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col8a2P25318 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.26■□□□□ 0.35
Col8a2P25318 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.26■□□□□ 0.35
Col8a2P25318 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col8a2P25318 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col8a2P25318 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.25■□□□□ 0.35
Col8a2P25318 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col8a2P25318 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.25■□□□□ 0.35
Col8a2P25318 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col8a2P25318 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col8a2P25318 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col8a2P25318 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col8a2P25318 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Col8a2P25318 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col8a2P25318 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col8a2P25318 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col8a2P25318 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col8a2P25318 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col8a2P25318 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col8a2P25318 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col8a2P25318 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.24■□□□□ 0.35
Col8a2P25318 Golgb1-201ENSMUST00000023534 498 ntBASIC17.24■□□□□ 0.35
Col8a2P25318 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col8a2P25318 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.23■□□□□ 0.35
Col8a2P25318 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col8a2P25318 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.23■□□□□ 0.35
Col8a2P25318 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col8a2P25318 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms