Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChrneP20782 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChrneP20782 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.48■□□□□ 0.71
ChrneP20782 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChrneP20782 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ChrneP20782 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChrneP20782 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ChrneP20782 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ChrneP20782 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChrneP20782 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChrneP20782 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
ChrneP20782 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.47■□□□□ 0.71
ChrneP20782 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.47■□□□□ 0.71
ChrneP20782 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChrneP20782 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ChrneP20782 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ChrneP20782 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChrneP20782 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChrneP20782 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
ChrneP20782 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChrneP20782 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChrneP20782 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
ChrneP20782 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.46■□□□□ 0.71
ChrneP20782 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ChrneP20782 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChrneP20782 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChrneP20782 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChrneP20782 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.45■□□□□ 0.7
ChrneP20782 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChrneP20782 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChrneP20782 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChrneP20782 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.44■□□□□ 0.7
ChrneP20782 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ChrneP20782 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ChrneP20782 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ChrneP20782 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChrneP20782 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ChrneP20782 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.43■□□□□ 0.7
ChrneP20782 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChrneP20782 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChrneP20782 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ChrneP20782 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChrneP20782 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ChrneP20782 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChrneP20782 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChrneP20782 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChrneP20782 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.42■□□□□ 0.7
ChrneP20782 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ChrneP20782 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ChrneP20782 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChrneP20782 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChrneP20782 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChrneP20782 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.41■□□□□ 0.7
ChrneP20782 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.41■□□□□ 0.7
ChrneP20782 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChrneP20782 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.4■□□□□ 0.7
ChrneP20782 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ChrneP20782 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.4■□□□□ 0.7
ChrneP20782 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ChrneP20782 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChrneP20782 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ChrneP20782 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ChrneP20782 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ChrneP20782 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.39■□□□□ 0.69
ChrneP20782 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ChrneP20782 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChrneP20782 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChrneP20782 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.39■□□□□ 0.69
ChrneP20782 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChrneP20782 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ChrneP20782 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChrneP20782 Gm22238-201ENSMUST00000175222 88 ntBASIC19.38■□□□□ 0.69
ChrneP20782 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ChrneP20782 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChrneP20782 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.37■□□□□ 0.69
ChrneP20782 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
ChrneP20782 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChrneP20782 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.36■□□□□ 0.69
ChrneP20782 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ChrneP20782 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChrneP20782 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChrneP20782 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms