Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col4a2P08122 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a2P08122 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.65■□□□□ 0.74
Col4a2P08122 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.65■□□□□ 0.74
Col4a2P08122 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.65■□□□□ 0.74
Col4a2P08122 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a2P08122 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a2P08122 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a2P08122 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.64■□□□□ 0.73
Col4a2P08122 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a2P08122 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a2P08122 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.63■□□□□ 0.73
Col4a2P08122 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a2P08122 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a2P08122 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a2P08122 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.62■□□□□ 0.73
Col4a2P08122 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a2P08122 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col4a2P08122 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col4a2P08122 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a2P08122 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Col4a2P08122 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a2P08122 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a2P08122 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a2P08122 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a2P08122 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.6■□□□□ 0.73
Col4a2P08122 Mir7075-201ENSMUST00000184187 82 ntBASIC19.6■□□□□ 0.73
Col4a2P08122 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a2P08122 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a2P08122 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col4a2P08122 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.6■□□□□ 0.73
Col4a2P08122 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a2P08122 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.59■□□□□ 0.73
Col4a2P08122 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Col4a2P08122 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Col4a2P08122 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a2P08122 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Col4a2P08122 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a2P08122 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.58■□□□□ 0.73
Col4a2P08122 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a2P08122 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a2P08122 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a2P08122 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Col4a2P08122 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a2P08122 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.57■□□□□ 0.72
Col4a2P08122 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.57■□□□□ 0.72
Col4a2P08122 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.57■□□□□ 0.72
Col4a2P08122 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a2P08122 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.57■□□□□ 0.72
Col4a2P08122 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.56■□□□□ 0.72
Col4a2P08122 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a2P08122 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col4a2P08122 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.56■□□□□ 0.72
Col4a2P08122 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a2P08122 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a2P08122 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a2P08122 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col4a2P08122 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a2P08122 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a2P08122 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Col4a2P08122 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.55■□□□□ 0.72
Col4a2P08122 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.55■□□□□ 0.72
Col4a2P08122 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a2P08122 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a2P08122 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a2P08122 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms