Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04943 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04943 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.7■□□□□ 0.26
P04943 Gm40881-201ENSMUST00000223397 166 ntBASIC16.7■□□□□ 0.26
P04943 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.69■□□□□ 0.26
P04943 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
P04943 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.69■□□□□ 0.26
P04943 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
P04943 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.69■□□□□ 0.26
P04943 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04943 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.69■□□□□ 0.26
P04943 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.69■□□□□ 0.26
P04943 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04943 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04943 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04943 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.68■□□□□ 0.26
P04943 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P04943 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04943 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04943 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04943 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04943 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04943 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04943 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.67■□□□□ 0.26
P04943 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
P04943 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.66■□□□□ 0.26
P04943 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.66■□□□□ 0.26
P04943 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.66■□□□□ 0.26
P04943 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04943 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04943 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04943 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.65■□□□□ 0.26
P04943 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04943 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04943 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04943 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04943 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.65■□□□□ 0.26
P04943 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
P04943 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
P04943 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
P04943 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.64■□□□□ 0.25
P04943 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04943 Gm15546-201ENSMUST00000122095 826 ntBASIC16.64■□□□□ 0.25
P04943 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.64■□□□□ 0.25
P04943 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P04943 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04943 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04943 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
P04943 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04943 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04943 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04943 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04943 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04943 Gm15820-201ENSMUST00000201566 728 ntBASIC16.63■□□□□ 0.25
P04943 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P04943 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04943 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04943 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P04943 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
P04943 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.62■□□□□ 0.25
P04943 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.62■□□□□ 0.25
P04943 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.62■□□□□ 0.25
P04943 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04943 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.61■□□□□ 0.25
P04943 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P04943 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04943 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.61■□□□□ 0.25
P04943 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04943 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
P04943 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04943 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.6■□□□□ 0.25
P04943 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms