Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PrnpP04925 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PrnpP04925 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PrnpP04925 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PrnpP04925 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PrnpP04925 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PrnpP04925 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PrnpP04925 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PrnpP04925 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.64■■□□□ 1.05
PrnpP04925 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PrnpP04925 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PrnpP04925 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PrnpP04925 Gm43173-201ENSMUST00000202246 593 ntBASIC21.63■■□□□ 1.05
PrnpP04925 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PrnpP04925 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PrnpP04925 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PrnpP04925 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PrnpP04925 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.62■■□□□ 1.05
PrnpP04925 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.62■■□□□ 1.05
PrnpP04925 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PrnpP04925 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.62■■□□□ 1.05
PrnpP04925 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PrnpP04925 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PrnpP04925 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PrnpP04925 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.62■■□□□ 1.05
PrnpP04925 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PrnpP04925 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PrnpP04925 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PrnpP04925 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PrnpP04925 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PrnpP04925 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PrnpP04925 Gm43530-201ENSMUST00000195920 274 ntBASIC21.61■■□□□ 1.05
PrnpP04925 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PrnpP04925 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PrnpP04925 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PrnpP04925 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PrnpP04925 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PrnpP04925 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PrnpP04925 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PrnpP04925 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PrnpP04925 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PrnpP04925 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PrnpP04925 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.59■■□□□ 1.05
PrnpP04925 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PrnpP04925 Gm12251-201ENSMUST00000117893 792 ntBASIC21.58■■□□□ 1.05
PrnpP04925 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PrnpP04925 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.58■■□□□ 1.05
PrnpP04925 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
PrnpP04925 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.04
PrnpP04925 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PrnpP04925 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PrnpP04925 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PrnpP04925 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PrnpP04925 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PrnpP04925 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PrnpP04925 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PrnpP04925 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PrnpP04925 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PrnpP04925 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PrnpP04925 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PrnpP04925 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PrnpP04925 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PrnpP04925 Gm5874-201ENSMUST00000096101 508 ntBASIC21.56■■□□□ 1.04
PrnpP04925 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PrnpP04925 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.55■■□□□ 1.04
PrnpP04925 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PrnpP04925 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.54■■□□□ 1.04
PrnpP04925 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
PrnpP04925 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PrnpP04925 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PrnpP04925 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PrnpP04925 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PrnpP04925 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.53■■□□□ 1.04
PrnpP04925 Spcs1-204ENSMUST00000226782 949 ntBASIC21.53■■□□□ 1.04
PrnpP04925 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.53■■□□□ 1.04
PrnpP04925 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PrnpP04925 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PrnpP04925 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PrnpP04925 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.52■■□□□ 1.04
PrnpP04925 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PrnpP04925 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
PrnpP04925 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.52■■□□□ 1.04
PrnpP04925 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PrnpP04925 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PrnpP04925 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PrnpP04925 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.52■■□□□ 1.03
PrnpP04925 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PrnpP04925 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms