Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.98■□□□□ 0.47
P04224 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
P04224 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
P04224 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.97■□□□□ 0.47
P04224 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
P04224 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
P04224 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
P04224 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
P04224 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P04224 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P04224 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P04224 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
P04224 Gm6311-201ENSMUST00000073790 878 ntBASIC17.96■□□□□ 0.47
P04224 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
P04224 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
P04224 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
P04224 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
P04224 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
P04224 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
P04224 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04224 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04224 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
P04224 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04224 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
P04224 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04224 Gm44428-201ENSMUST00000204474 874 ntBASIC17.94■□□□□ 0.46
P04224 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
P04224 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04224 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04224 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04224 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.93■□□□□ 0.46
P04224 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
P04224 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04224 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04224 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04224 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04224 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
P04224 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
P04224 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
P04224 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04224 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.91■□□□□ 0.46
P04224 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
P04224 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
P04224 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
P04224 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04224 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
P04224 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04224 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04224 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04224 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.9■□□□□ 0.46
P04224 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
P04224 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.9■□□□□ 0.46
P04224 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
P04224 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04224 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
P04224 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
P04224 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04224 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04224 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P04224 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
P04224 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P04224 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04224 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04224 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04224 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.88■□□□□ 0.45
P04224 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04224 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
P04224 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04224 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.88■□□□□ 0.45
P04224 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04224 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms