Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3cP02301 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3cP02301 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
H3f3cP02301 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.67■□□□□ 0.42
H3f3cP02301 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.67■□□□□ 0.42
H3f3cP02301 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.67■□□□□ 0.42
H3f3cP02301 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
H3f3cP02301 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.67■□□□□ 0.42
H3f3cP02301 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3cP02301 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
H3f3cP02301 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
H3f3cP02301 Gm40881-201ENSMUST00000223397 166 ntBASIC17.66■□□□□ 0.42
H3f3cP02301 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3cP02301 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3cP02301 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3cP02301 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3cP02301 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3cP02301 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
H3f3cP02301 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3cP02301 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3cP02301 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3cP02301 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.65■□□□□ 0.42
H3f3cP02301 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3cP02301 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3cP02301 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
H3f3cP02301 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3f3cP02301 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3f3cP02301 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3f3cP02301 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.64■□□□□ 0.41
H3f3cP02301 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.64■□□□□ 0.41
H3f3cP02301 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3f3cP02301 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3f3cP02301 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H3f3cP02301 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H3f3cP02301 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
H3f3cP02301 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
H3f3cP02301 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.63■□□□□ 0.41
H3f3cP02301 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.63■□□□□ 0.41
H3f3cP02301 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H3f3cP02301 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
H3f3cP02301 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.62■□□□□ 0.41
H3f3cP02301 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H3f3cP02301 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3f3cP02301 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3f3cP02301 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
H3f3cP02301 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
H3f3cP02301 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3f3cP02301 Gm9959-201ENSMUST00000068277 390 ntBASIC17.61■□□□□ 0.41
H3f3cP02301 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3f3cP02301 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3f3cP02301 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H3f3cP02301 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
H3f3cP02301 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.6■□□□□ 0.41
H3f3cP02301 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3f3cP02301 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3f3cP02301 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3f3cP02301 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.6■□□□□ 0.41
H3f3cP02301 Gm45102-201ENSMUST00000207427 857 ntBASIC17.6■□□□□ 0.41
H3f3cP02301 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
H3f3cP02301 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H3f3cP02301 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
H3f3cP02301 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
H3f3cP02301 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
H3f3cP02301 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.59■□□□□ 0.41
H3f3cP02301 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.59■□□□□ 0.41
H3f3cP02301 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.59■□□□□ 0.41
H3f3cP02301 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.59■□□□□ 0.41
H3f3cP02301 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
H3f3cP02301 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
H3f3cP02301 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H3f3cP02301 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H3f3cP02301 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
H3f3cP02301 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
H3f3cP02301 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H3f3cP02301 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms