Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcd4O89016 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Abcd4O89016 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.6■□□□□ 0.57
Abcd4O89016 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcd4O89016 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcd4O89016 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcd4O89016 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Abcd4O89016 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcd4O89016 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.59■□□□□ 0.57
Abcd4O89016 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcd4O89016 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Abcd4O89016 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcd4O89016 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abcd4O89016 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.58■□□□□ 0.57
Abcd4O89016 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abcd4O89016 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcd4O89016 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcd4O89016 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.58■□□□□ 0.56
Abcd4O89016 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Abcd4O89016 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.58■□□□□ 0.56
Abcd4O89016 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcd4O89016 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Abcd4O89016 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.58■□□□□ 0.56
Abcd4O89016 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcd4O89016 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Abcd4O89016 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Abcd4O89016 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
Abcd4O89016 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.57■□□□□ 0.56
Abcd4O89016 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Abcd4O89016 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Abcd4O89016 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abcd4O89016 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcd4O89016 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcd4O89016 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcd4O89016 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.56■□□□□ 0.56
Abcd4O89016 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcd4O89016 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Abcd4O89016 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcd4O89016 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcd4O89016 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.55■□□□□ 0.56
Abcd4O89016 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.55■□□□□ 0.56
Abcd4O89016 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Abcd4O89016 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Abcd4O89016 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcd4O89016 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Abcd4O89016 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Abcd4O89016 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Abcd4O89016 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.55■□□□□ 0.56
Abcd4O89016 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Abcd4O89016 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcd4O89016 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcd4O89016 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Abcd4O89016 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Abcd4O89016 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.54■□□□□ 0.56
Abcd4O89016 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Abcd4O89016 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Abcd4O89016 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcd4O89016 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcd4O89016 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcd4O89016 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcd4O89016 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Abcd4O89016 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcd4O89016 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcd4O89016 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcd4O89016 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.52■□□□□ 0.56
Abcd4O89016 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.52■□□□□ 0.56
Abcd4O89016 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.52■□□□□ 0.56
Abcd4O89016 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcd4O89016 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.52■□□□□ 0.56
Abcd4O89016 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.52■□□□□ 0.56
Abcd4O89016 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Abcd4O89016 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Abcd4O89016 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcd4O89016 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcd4O89016 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcd4O89016 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abcd4O89016 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.51■□□□□ 0.55
Abcd4O89016 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Abcd4O89016 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Abcd4O89016 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcd4O89016 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.5■□□□□ 0.55
Abcd4O89016 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcd4O89016 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Abcd4O89016 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcd4O89016 Gm21956-201ENSMUST00000179946 522 ntBASIC18.5■□□□□ 0.55
Abcd4O89016 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.5■□□□□ 0.55
Abcd4O89016 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.5■□□□□ 0.55
Abcd4O89016 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcd4O89016 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms