Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.53□□□□□ -0.08
Sh2d1aO88890 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh2d1aO88890 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.52□□□□□ -0.08
Sh2d1aO88890 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh2d1aO88890 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh2d1aO88890 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.51□□□□□ -0.09
Sh2d1aO88890 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh2d1aO88890 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.5□□□□□ -0.09
Sh2d1aO88890 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh2d1aO88890 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Sh2d1aO88890 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh2d1aO88890 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.47□□□□□ -0.09
Sh2d1aO88890 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Gm45444-201ENSMUST00000211394 898 ntBASIC14.47□□□□□ -0.09
Sh2d1aO88890 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.47□□□□□ -0.09
Sh2d1aO88890 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh2d1aO88890 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.47□□□□□ -0.09
Sh2d1aO88890 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh2d1aO88890 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh2d1aO88890 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh2d1aO88890 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.46□□□□□ -0.09
Sh2d1aO88890 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms