Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn1O88704 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn1O88704 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn1O88704 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn1O88704 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Hcn1O88704 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn1O88704 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn1O88704 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn1O88704 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.66■□□□□ 0.74
Hcn1O88704 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Hcn1O88704 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn1O88704 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn1O88704 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn1O88704 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Hcn1O88704 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn1O88704 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn1O88704 Iqck-206ENSMUST00000208658 2891 ntBASIC19.65■□□□□ 0.74
Hcn1O88704 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.65■□□□□ 0.74
Hcn1O88704 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.65■□□□□ 0.74
Hcn1O88704 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.65■□□□□ 0.74
Hcn1O88704 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn1O88704 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.65■□□□□ 0.74
Hcn1O88704 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Hcn1O88704 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hcn1O88704 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn1O88704 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn1O88704 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.64■□□□□ 0.73
Hcn1O88704 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn1O88704 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hcn1O88704 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn1O88704 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hcn1O88704 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Hcn1O88704 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn1O88704 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hcn1O88704 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.62■□□□□ 0.73
Hcn1O88704 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Hcn1O88704 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn1O88704 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Hcn1O88704 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn1O88704 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn1O88704 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn1O88704 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn1O88704 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn1O88704 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.6■□□□□ 0.73
Hcn1O88704 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.59■□□□□ 0.73
Hcn1O88704 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Hcn1O88704 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn1O88704 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn1O88704 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Hcn1O88704 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.58■□□□□ 0.73
Hcn1O88704 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn1O88704 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn1O88704 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcn1O88704 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcn1O88704 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.58■□□□□ 0.72
Hcn1O88704 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn1O88704 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Hcn1O88704 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn1O88704 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn1O88704 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn1O88704 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.57■□□□□ 0.72
Hcn1O88704 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.57■□□□□ 0.72
Hcn1O88704 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn1O88704 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn1O88704 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hcn1O88704 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hcn1O88704 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms