Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.25■□□□□ 0.67
Tulp3O88413 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tulp3O88413 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tulp3O88413 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tulp3O88413 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tulp3O88413 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tulp3O88413 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.24■□□□□ 0.67
Tulp3O88413 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tulp3O88413 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tulp3O88413 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tulp3O88413 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tulp3O88413 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tulp3O88413 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tulp3O88413 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tulp3O88413 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tulp3O88413 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.22■□□□□ 0.67
Tulp3O88413 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tulp3O88413 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tulp3O88413 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tulp3O88413 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.21■□□□□ 0.67
Tulp3O88413 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tulp3O88413 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tulp3O88413 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tulp3O88413 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tulp3O88413 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tulp3O88413 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tulp3O88413 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tulp3O88413 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tulp3O88413 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tulp3O88413 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tulp3O88413 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tulp3O88413 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tulp3O88413 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tulp3O88413 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tulp3O88413 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.18■□□□□ 0.66
Tulp3O88413 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.18■□□□□ 0.66
Tulp3O88413 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tulp3O88413 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tulp3O88413 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tulp3O88413 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tulp3O88413 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tulp3O88413 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.18■□□□□ 0.66
Tulp3O88413 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tulp3O88413 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Tulp3O88413 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tulp3O88413 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tulp3O88413 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tulp3O88413 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms