Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Kcnu1O54982 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.08■■□□□ 1.13
Kcnu1O54982 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Kcnu1O54982 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Kcnu1O54982 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Kcnu1O54982 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Kcnu1O54982 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Kcnu1O54982 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kcnu1O54982 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.06■■□□□ 1.12
Kcnu1O54982 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.06■■□□□ 1.12
Kcnu1O54982 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Kcnu1O54982 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kcnu1O54982 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Kcnu1O54982 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kcnu1O54982 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.05■■□□□ 1.12
Kcnu1O54982 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kcnu1O54982 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kcnu1O54982 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kcnu1O54982 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Kcnu1O54982 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Kcnu1O54982 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
Kcnu1O54982 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Kcnu1O54982 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Kcnu1O54982 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Kcnu1O54982 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Kcnu1O54982 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Kcnu1O54982 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Kcnu1O54982 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Kcnu1O54982 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Kcnu1O54982 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Kcnu1O54982 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kcnu1O54982 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kcnu1O54982 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kcnu1O54982 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kcnu1O54982 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Kcnu1O54982 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22■■□□□ 1.11
Kcnu1O54982 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Kcnu1O54982 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Kcnu1O54982 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Kcnu1O54982 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Kcnu1O54982 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.99■■□□□ 1.11
Kcnu1O54982 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Kcnu1O54982 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.99■■□□□ 1.11
Kcnu1O54982 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Kcnu1O54982 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kcnu1O54982 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kcnu1O54982 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.98■■□□□ 1.11
Kcnu1O54982 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kcnu1O54982 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.98■■□□□ 1.11
Kcnu1O54982 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kcnu1O54982 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Kcnu1O54982 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Kcnu1O54982 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Kcnu1O54982 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Kcnu1O54982 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Kcnu1O54982 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Kcnu1O54982 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Kcnu1O54982 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Kcnu1O54982 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Kcnu1O54982 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.97■■□□□ 1.11
Kcnu1O54982 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Kcnu1O54982 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Kcnu1O54982 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Kcnu1O54982 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Kcnu1O54982 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 637 ms