Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Matn3O35701 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Matn3O35701 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.71■□□□□ 0.59
Matn3O35701 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn3O35701 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn3O35701 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn3O35701 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn3O35701 Gm11175-201ENSMUST00000116172 543 ntBASIC18.7■□□□□ 0.58
Matn3O35701 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.7■□□□□ 0.58
Matn3O35701 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.7■□□□□ 0.58
Matn3O35701 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn3O35701 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Matn3O35701 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn3O35701 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.7■□□□□ 0.58
Matn3O35701 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn3O35701 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Matn3O35701 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Matn3O35701 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Matn3O35701 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Matn3O35701 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Matn3O35701 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Matn3O35701 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.68■□□□□ 0.58
Matn3O35701 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Matn3O35701 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.68■□□□□ 0.58
Matn3O35701 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.68■□□□□ 0.58
Matn3O35701 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Matn3O35701 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn3O35701 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.67■□□□□ 0.58
Matn3O35701 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Matn3O35701 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn3O35701 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn3O35701 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Matn3O35701 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn3O35701 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Matn3O35701 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn3O35701 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn3O35701 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn3O35701 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Matn3O35701 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn3O35701 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Matn3O35701 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Mir3960-201ENSMUST00000198213 73 ntBASIC18.65■□□□□ 0.58
Matn3O35701 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Matn3O35701 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Matn3O35701 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn3O35701 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Matn3O35701 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Matn3O35701 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn3O35701 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.64■□□□□ 0.57
Matn3O35701 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.64■□□□□ 0.57
Matn3O35701 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn3O35701 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Matn3O35701 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.64■□□□□ 0.57
Matn3O35701 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.64■□□□□ 0.57
Matn3O35701 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Matn3O35701 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn3O35701 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Matn3O35701 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn3O35701 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn3O35701 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn3O35701 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn3O35701 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn3O35701 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.63■□□□□ 0.57
Matn3O35701 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.63■□□□□ 0.57
Matn3O35701 Gm6311-201ENSMUST00000073790 878 ntBASIC18.63■□□□□ 0.57
Matn3O35701 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Matn3O35701 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn3O35701 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.63■□□□□ 0.57
Matn3O35701 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Matn3O35701 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn3O35701 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms