Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Col15a1O35206 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Col15a1O35206 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Col15a1O35206 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col15a1O35206 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col15a1O35206 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col15a1O35206 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Col15a1O35206 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Col15a1O35206 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Col15a1O35206 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Col15a1O35206 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Col15a1O35206 AC166356.1-201ENSMUST00000228236 1426 ntBASIC27.01■■□□□ 1.91
Col15a1O35206 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col15a1O35206 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col15a1O35206 Gm29257-201ENSMUST00000186115 639 ntBASIC27■■□□□ 1.91
Col15a1O35206 Gm43530-201ENSMUST00000195920 274 ntBASIC27■■□□□ 1.91
Col15a1O35206 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col15a1O35206 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col15a1O35206 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col15a1O35206 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Col15a1O35206 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col15a1O35206 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col15a1O35206 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.98■■□□□ 1.91
Col15a1O35206 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC26.98■■□□□ 1.91
Col15a1O35206 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col15a1O35206 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Col15a1O35206 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col15a1O35206 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.98■■□□□ 1.91
Col15a1O35206 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col15a1O35206 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col15a1O35206 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.98■■□□□ 1.91
Col15a1O35206 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col15a1O35206 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Col15a1O35206 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
Col15a1O35206 Spcs1-204ENSMUST00000226782 949 ntBASIC26.97■■□□□ 1.91
Col15a1O35206 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Col15a1O35206 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col15a1O35206 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col15a1O35206 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC26.97■■□□□ 1.91
Col15a1O35206 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col15a1O35206 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Col15a1O35206 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC26.97■■□□□ 1.91
Col15a1O35206 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col15a1O35206 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col15a1O35206 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col15a1O35206 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.96■■□□□ 1.91
Col15a1O35206 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.96■■□□□ 1.91
Col15a1O35206 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Col15a1O35206 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Col15a1O35206 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Col15a1O35206 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.95■■□□□ 1.9
Col15a1O35206 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.95■■□□□ 1.9
Col15a1O35206 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Col15a1O35206 Cdc34b-202ENSMUST00000188741 1252 ntBASIC26.95■■□□□ 1.9
Col15a1O35206 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Col15a1O35206 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Col15a1O35206 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Col15a1O35206 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Col15a1O35206 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col15a1O35206 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col15a1O35206 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Col15a1O35206 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col15a1O35206 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Col15a1O35206 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.93■■□□□ 1.9
Col15a1O35206 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Col15a1O35206 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Col15a1O35206 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Col15a1O35206 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col15a1O35206 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col15a1O35206 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Col15a1O35206 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col15a1O35206 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.92■■□□□ 1.9
Col15a1O35206 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Col15a1O35206 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col15a1O35206 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.91■■□□□ 1.9
Col15a1O35206 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Col15a1O35206 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Col15a1O35206 Gm26571-201ENSMUST00000181399 666 ntBASIC26.91■■□□□ 1.9
Col15a1O35206 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col15a1O35206 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Col15a1O35206 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Col15a1O35206 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col15a1O35206 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Col15a1O35206 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.9■■□□□ 1.9
Col15a1O35206 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC26.9■■□□□ 1.9
Col15a1O35206 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Col15a1O35206 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col15a1O35206 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col15a1O35206 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col15a1O35206 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.89■■□□□ 1.9
Col15a1O35206 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC26.89■■□□□ 1.9
Col15a1O35206 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Col15a1O35206 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Col15a1O35206 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col15a1O35206 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col15a1O35206 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col15a1O35206 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col15a1O35206 Gm26833-201ENSMUST00000180899 440 ntBASIC26.87■■□□□ 1.89
Col15a1O35206 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.87■■□□□ 1.89
Col15a1O35206 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC26.86■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms