Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm10553J3QPF1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm10553J3QPF1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm10553J3QPF1 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.78■□□□□ 0.12
Gm10553J3QPF1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gm10553J3QPF1 Gm22238-201ENSMUST00000175222 88 ntBASIC15.78■□□□□ 0.12
Gm10553J3QPF1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.78■□□□□ 0.12
Gm10553J3QPF1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gm10553J3QPF1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm10553J3QPF1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gm10553J3QPF1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10553J3QPF1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm10553J3QPF1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm10553J3QPF1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm10553J3QPF1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gm10553J3QPF1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10553J3QPF1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10553J3QPF1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10553J3QPF1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm10553J3QPF1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.73■□□□□ 0.11
Gm10553J3QPF1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm10553J3QPF1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Gm10553J3QPF1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10553J3QPF1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm10553J3QPF1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm10553J3QPF1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm10553J3QPF1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.71■□□□□ 0.1
Gm10553J3QPF1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.71■□□□□ 0.1
Gm10553J3QPF1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm10553J3QPF1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10553J3QPF1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms