Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21818J3KMS6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21818J3KMS6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21818J3KMS6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21818J3KMS6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21818J3KMS6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21818J3KMS6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Gm21818J3KMS6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.58■□□□□ 0.4
Gm21818J3KMS6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21818J3KMS6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21818J3KMS6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21818J3KMS6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Gm21818J3KMS6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21818J3KMS6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21818J3KMS6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21818J3KMS6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21818J3KMS6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21818J3KMS6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm21818J3KMS6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm21818J3KMS6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gm21818J3KMS6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm21818J3KMS6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm21818J3KMS6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.52■□□□□ 0.39
Gm21818J3KMS6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm21818J3KMS6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm21818J3KMS6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm21818J3KMS6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm21818J3KMS6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms