Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptchd4B9EKX1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.36■■□□□ 1.17
Ptchd4B9EKX1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.36■■□□□ 1.17
Ptchd4B9EKX1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Ptchd4B9EKX1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ptchd4B9EKX1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.36■■□□□ 1.17
Ptchd4B9EKX1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Ptchd4B9EKX1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptchd4B9EKX1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ptchd4B9EKX1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Mir7075-201ENSMUST00000184187 82 ntBASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ptchd4B9EKX1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptchd4B9EKX1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptchd4B9EKX1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.33■■□□□ 1.17
Ptchd4B9EKX1 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.33■■□□□ 1.17
Ptchd4B9EKX1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptchd4B9EKX1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ptchd4B9EKX1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptchd4B9EKX1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ptchd4B9EKX1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Gm43530-201ENSMUST00000195920 274 ntBASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptchd4B9EKX1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.28■■□□□ 1.16
Ptchd4B9EKX1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.28■■□□□ 1.16
Ptchd4B9EKX1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptchd4B9EKX1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Ptchd4B9EKX1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptchd4B9EKX1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptchd4B9EKX1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptchd4B9EKX1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ptchd4B9EKX1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptchd4B9EKX1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Gm8493-201ENSMUST00000196881 489 ntBASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Gm43017-201ENSMUST00000198296 752 ntBASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptchd4B9EKX1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms