Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a4A2AX52 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.48■□□□□ 0.39
Col6a4A2AX52 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Col6a4A2AX52 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col6a4A2AX52 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.47■□□□□ 0.39
Col6a4A2AX52 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.47■□□□□ 0.39
Col6a4A2AX52 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Gm26833-201ENSMUST00000180899 440 ntBASIC17.47■□□□□ 0.39
Col6a4A2AX52 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a4A2AX52 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a4A2AX52 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a4A2AX52 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a4A2AX52 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.46■□□□□ 0.39
Col6a4A2AX52 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Col6a4A2AX52 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a4A2AX52 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a4A2AX52 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a4A2AX52 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.46■□□□□ 0.38
Col6a4A2AX52 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col6a4A2AX52 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Col6a4A2AX52 Gm42569-201ENSMUST00000200539 472 ntBASIC17.46■□□□□ 0.38
Col6a4A2AX52 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Col6a4A2AX52 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a4A2AX52 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col6a4A2AX52 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.45■□□□□ 0.38
Col6a4A2AX52 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a4A2AX52 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a4A2AX52 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a4A2AX52 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a4A2AX52 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.43■□□□□ 0.38
Col6a4A2AX52 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.43■□□□□ 0.38
Col6a4A2AX52 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a4A2AX52 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.42■□□□□ 0.38
Col6a4A2AX52 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Gm10033-202ENSMUST00000211874 928 ntBASIC17.42■□□□□ 0.38
Col6a4A2AX52 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a4A2AX52 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a4A2AX52 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col6a4A2AX52 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a4A2AX52 Gm43060-201ENSMUST00000200621 289 ntBASIC17.41■□□□□ 0.38
Col6a4A2AX52 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a4A2AX52 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.41■□□□□ 0.38
Col6a4A2AX52 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.41■□□□□ 0.38
Col6a4A2AX52 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.41■□□□□ 0.38
Col6a4A2AX52 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col6a4A2AX52 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Col6a4A2AX52 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a4A2AX52 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.39■□□□□ 0.38
Col6a4A2AX52 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.39■□□□□ 0.38
Col6a4A2AX52 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col6a4A2AX52 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a4A2AX52 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a4A2AX52 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a4A2AX52 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a4A2AX52 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms