Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-1A0N8R1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-1A0N8R1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Gm10420-201ENSMUST00000121713 882 ntBASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.22■□□□□ 0.35
Trav12-1A0N8R1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Gm12366-201ENSMUST00000121722 873 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Gm5786-201ENSMUST00000085368 882 ntBASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-1A0N8R1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav12-1A0N8R1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-1A0N8R1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-1A0N8R1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms