Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3854A0A1B0GSS6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3854A0A1B0GSS6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3854A0A1B0GSS6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3854A0A1B0GSS6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3854A0A1B0GSS6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.77■□□□□ 0.92
Gm3854A0A1B0GSS6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3854A0A1B0GSS6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3854A0A1B0GSS6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3854A0A1B0GSS6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm3854A0A1B0GSS6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3854A0A1B0GSS6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3854A0A1B0GSS6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3854A0A1B0GSS6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3854A0A1B0GSS6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3854A0A1B0GSS6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gm3854A0A1B0GSS6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Gm3854A0A1B0GSS6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Gm3854A0A1B0GSS6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3854A0A1B0GSS6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3854A0A1B0GSS6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3854A0A1B0GSS6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm3854A0A1B0GSS6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.73■□□□□ 0.91
Gm3854A0A1B0GSS6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3854A0A1B0GSS6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3854A0A1B0GSS6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.73■□□□□ 0.91
Gm3854A0A1B0GSS6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3854A0A1B0GSS6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3854A0A1B0GSS6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3854A0A1B0GSS6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3854A0A1B0GSS6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3854A0A1B0GSS6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3854A0A1B0GSS6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm3854A0A1B0GSS6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3854A0A1B0GSS6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3854A0A1B0GSS6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3854A0A1B0GSS6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3854A0A1B0GSS6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3854A0A1B0GSS6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3854A0A1B0GSS6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Gm43173-201ENSMUST00000202246 593 ntBASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3854A0A1B0GSS6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3854A0A1B0GSS6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms