Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.51■■□□□ 1.19
Gm5580A0A0N4SVP8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5580A0A0N4SVP8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5580A0A0N4SVP8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5580A0A0N4SVP8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5580A0A0N4SVP8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm5580A0A0N4SVP8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm5580A0A0N4SVP8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Gm5580A0A0N4SVP8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.48■■□□□ 1.19
Gm5580A0A0N4SVP8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm5580A0A0N4SVP8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Gm5580A0A0N4SVP8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Gm5580A0A0N4SVP8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm5580A0A0N4SVP8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Gm5580A0A0N4SVP8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm5580A0A0N4SVP8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm5580A0A0N4SVP8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm5580A0A0N4SVP8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm5580A0A0N4SVP8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.41■■□□□ 1.18
Gm5580A0A0N4SVP8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 772.1 ms