Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Gm22238-201ENSMUST00000175222 88 ntBASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms