Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv5-43A0A0B4J1J2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv5-43A0A0B4J1J2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Igkv5-43A0A0B4J1J2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Igkv5-43A0A0B4J1J2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv5-43A0A0B4J1J2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv5-43A0A0B4J1J2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv5-43A0A0B4J1J2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.28■■□□□ 1
Igkv5-43A0A0B4J1J2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv5-43A0A0B4J1J2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.28■■□□□ 1
Igkv5-43A0A0B4J1J2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv5-43A0A0B4J1J2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.27■■□□□ 1
Igkv5-43A0A0B4J1J2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.27■■□□□ 1
Igkv5-43A0A0B4J1J2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.27■■□□□ 1
Igkv5-43A0A0B4J1J2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
Igkv5-43A0A0B4J1J2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.26■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv5-43A0A0B4J1J2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv5-43A0A0B4J1J2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Igkv5-43A0A0B4J1J2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms