Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Gm7143-201ENSMUST00000222811 859 ntBASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Gm14117-201ENSMUST00000122417 843 ntBASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.34■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm22238-201ENSMUST00000175222 88 ntBASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.32■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm9870-201ENSMUST00000063874 645 ntBASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv12-1A0A0B4J1H0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.27■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.27■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trbv12-1A0A0B4J1H0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms