Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv1A0A075B657 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.71■□□□□ 0.11
Trdv1A0A075B657 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trdv1A0A075B657 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdv1A0A075B657 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.68■□□□□ 0.1
Trdv1A0A075B657 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdv1A0A075B657 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.66■□□□□ 0.1
Trdv1A0A075B657 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trdv1A0A075B657 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdv1A0A075B657 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdv1A0A075B657 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdv1A0A075B657 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdv1A0A075B657 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdv1A0A075B657 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdv1A0A075B657 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms