Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Gm4310-201ENSMUST00000177847 889 ntBASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm9630-201ENSMUST00000178304 885 ntBASIC11.48□□□□□ -0.57
SrfQ9JM73 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Mir8115-201ENSMUST00000184992 119 ntBASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm17877-201ENSMUST00000192578 814 ntBASIC11.48□□□□□ -0.57
SrfQ9JM73 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm44353-201ENSMUST00000200618 138 ntBASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Gm6867-201ENSMUST00000219165 425 ntBASIC11.48□□□□□ -0.57
SrfQ9JM73 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SrfQ9JM73 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SrfQ9JM73 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm22711-201ENSMUST00000116890 133 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm12899-201ENSMUST00000120565 551 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm5706-201ENSMUST00000181525 993 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm21139-201ENSMUST00000186594 877 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm4034-201ENSMUST00000187674 480 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm43520-201ENSMUST00000197996 164 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm5298-201ENSMUST00000201122 892 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.47□□□□□ -0.57
SrfQ9JM73 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.47□□□□□ -0.57
SrfQ9JM73 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SrfQ9JM73 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Mir466f-2-201ENSMUST00000104805 94 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SrfQ9JM73 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Mir1192-201ENSMUST00000116976 121 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm11340-201ENSMUST00000119226 412 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.46□□□□□ -0.57
SrfQ9JM73 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.46□□□□□ -0.57
SrfQ9JM73 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms