Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.65□□□□□ -0.38
Ddx56Q9D0R4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx56Q9D0R4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx56Q9D0R4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx56Q9D0R4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ddx56Q9D0R4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ddx56Q9D0R4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ddx56Q9D0R4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm18893-201ENSMUST00000198416 943 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm7783-201ENSMUST00000204795 781 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm44651-201ENSMUST00000207343 372 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ddx56Q9D0R4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ddx56Q9D0R4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms