Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Gm5455-201ENSMUST00000058710 715 ntBASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb2Q91Y00 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm11511-201ENSMUST00000118146 540 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm15610-201ENSMUST00000120584 195 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm5616-201ENSMUST00000165252 384 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm8741-201ENSMUST00000174736 384 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm37466-201ENSMUST00000195692 652 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb2Q91Y00 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Mir7677-201ENSMUST00000184226 67 ntBASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Gm28450-201ENSMUST00000187349 638 ntBASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Gm18038-201ENSMUST00000197900 485 ntBASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pcdhb2Q91Y00 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms