Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm8956-201ENSMUST00000203939 825 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm44967-201ENSMUST00000207047 631 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.34□□□□□ -0.43
Pcdhb6Q91XZ4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb6Q91XZ4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb6Q91XZ4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm13296-201ENSMUST00000117854 997 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm13350-201ENSMUST00000120519 479 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm13665-201ENSMUST00000120830 528 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm7584-201ENSMUST00000175829 940 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm45224-201ENSMUST00000208203 414 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb6Q91XZ4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm25890-201ENSMUST00000177643 165 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm25700-201ENSMUST00000177693 110 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm22614-201ENSMUST00000178300 165 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm6114-201ENSMUST00000182472 968 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms