Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Gm8712-201ENSMUST00000221090 701 ntBASIC11□□□□□ -0.65
Nkd2Q8VE28 AC154222.2-201ENSMUST00000225848 607 ntBASIC11□□□□□ -0.65
Nkd2Q8VE28 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Gm8385-201ENSMUST00000058999 643 ntBASIC11□□□□□ -0.65
Nkd2Q8VE28 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkd2Q8VE28 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11□□□□□ -0.65
Nkd2Q8VE28 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11□□□□□ -0.65
Nkd2Q8VE28 Gm43908-201ENSMUST00000205074 1472 ntBASIC11□□□□□ -0.65
Nkd2Q8VE28 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkd2Q8VE28 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Gm13736-201ENSMUST00000119272 253 ntBASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkd2Q8VE28 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Gm13996-201ENSMUST00000118456 430 ntBASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Nkd2Q8VE28 Gm8018-201ENSMUST00000173536 789 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms