Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Gm14441-201ENSMUST00000121960 540 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Gm27682-201ENSMUST00000183930 110 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Gm10268-201ENSMUST00000085340 555 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm11591-201ENSMUST00000120063 702 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Rprl1-201ENSMUST00000158050 327 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm7561-201ENSMUST00000211203 886 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lysmd4Q8CC84 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms