Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Gm2260-201ENSMUST00000184965 657 ntBASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.03□□□□□ -0.16
Usp44Q8C2S0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Gm8385-201ENSMUST00000058999 643 ntBASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Gm26448-201ENSMUST00000082446 203 ntBASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp44Q8C2S0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Gm2383-201ENSMUST00000181461 807 ntBASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Gm3332-201ENSMUST00000189337 928 ntBASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Gm43184-201ENSMUST00000197247 542 ntBASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp44Q8C2S0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm23596-201ENSMUST00000104304 132 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Mir7677-201ENSMUST00000184226 67 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm18212-201ENSMUST00000211678 889 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp44Q8C2S0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Usp44Q8C2S0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp44Q8C2S0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Usp44Q8C2S0 Gm15236-201ENSMUST00000117309 379 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms