Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm11450-201ENSMUST00000121144 333 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm12566-201ENSMUST00000121479 359 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm18734-201ENSMUST00000172937 808 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm43184-201ENSMUST00000197247 542 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm5705-201ENSMUST00000066241 711 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim47Q8C0E3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim47Q8C0E3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim47Q8C0E3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trim47Q8C0E3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm12857-201ENSMUST00000117678 592 ntBASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm28686-201ENSMUST00000187404 609 ntBASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim47Q8C0E3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms