Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim6Q8BGE7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim6Q8BGE7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trim6Q8BGE7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim6Q8BGE7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim6Q8BGE7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim6Q8BGE7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim6Q8BGE7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gm12314-201ENSMUST00000118104 538 ntBASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gm18584-201ENSMUST00000203098 964 ntBASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim6Q8BGE7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.75□□□□□ -0.37
Trim6Q8BGE7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms