Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm24891-201ENSMUST00000104391 136 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm15610-201ENSMUST00000120584 195 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm14247-201ENSMUST00000120950 237 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm3332-201ENSMUST00000189337 928 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm6905-201ENSMUST00000205729 511 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm8959-201ENSMUST00000213150 571 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm15515-201ENSMUST00000117827 822 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm13611-201ENSMUST00000118269 318 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm5419-201ENSMUST00000119301 527 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm11941-201ENSMUST00000119904 610 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm11660-201ENSMUST00000120955 412 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm4482-201ENSMUST00000200876 742 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm5705-201ENSMUST00000066241 711 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh19Q80TF3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms